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Publications


Publications
A High Throughput Assay for Discovery of Bacterial β-Glucuronidase Inhibitors.

Current chemical genomics

Ahmad S, Hughes MA, Lane KT, Redinbo MR, Yeh L, Scott JE
Current chemical genomics - vol. 5 13-20 (2011)

CPT-11 is a widely-used anti-cancer drug that is converted in vivo to its active metabolite, SN-38. In the liver, enzymes detoxify SN-38 by coupling it to a glucuronidate moiety and this inactive compound (SN-38G) is excreted into the gastrointestinal tract. In the intestine, commensal bacteria convert the SN-38G back to the active and toxic SN-38 […]

Publications
Gene expression-based chemical genomics identifies potential therapeutic drugs in hepatocellular carcinoma

PLoS ONE

Chen MH, Yang WLR, Lin KT, Liu CH, Liu YW, Huang KW, Chang PMH, Lai JM, Hsu CN, Chao KM, Kao CY, Huang CYF
PLoS ONE - vol. 6 (2011)

Hepatocellular carcinoma (HCC) is an aggressive tumor with a poor prognosis. Currently, only sorafenib is approved by the FDA for advanced HCC treatment; therefore, there is an urgent need to discover candidate therapeutic drugs for HCC. We hypothesized that if a drug signature could reverse, at least in part, the gene expression signature of HCC, […]

Publications
A yeast-based assay identifies drugs active against human mitochondrial disorders.

PNAS USA

Couplan E, Aiyar RS, Kucharczyk R, Kabala A, Ezkurdia N, Gagneur J, St Onge RP, Salin B, Soubigou F, Le Cann M, Steinmetz LM, di Rago J, Blondel M
PNAS USA - vol. 108 11989-11994 (2011)

Due to the lack of relevant animal models, development of effective treatments for human mitochondrial diseases has been limited. Here we establish a rapid, yeast-based assay to screen for drugs active against human inherited mitochondrial diseases affecting ATP synthase, in particular NARP (neuropathy, ataxia, and retinitis pigmentosa) syndrome. This method is based on the conservation […]

Publications
Discovery of Very Late Antigen-4 (VLA-4, α4β 1 integrin) allosteric antagonists

Journal of Biological Chemistry

Chigaev A, Wu Y, Williams DB, Smagley Y, Sklar LA
Journal of Biological Chemistry - vol. 286 5455-5463 (2011)

Integrins are cell adhesion receptors that mediate cell-to-cell, or cell-to-extracellular matrix adhesion. They represent an attractive target for treatment of multiple diseases. Two classes of small molecule integrin inhibitors have been developed. Competitive antagonists bind directly to the integrin ligand binding pocket and thus disrupt the ligand-receptor interaction. Allosteric antagonists have been developed primarily for […]

Publications
In silico repositioning of approved drugs for rare and neglected diseases

Drug Discovery Today

Ekins S, Williams AJ, Krasowski MD, Freundlich JS
Drug Discovery Today - vol. 16 298-310 (2011)

One approach to speed up drug discovery is to examine new uses for existing approved drugs, so-called ‘drug repositioning’ or ‘drug repurposing’, which has become increasingly popular in recent years. Analysis of the literature reveals many examples of US Food and Drug Administration-approved drugs that are active against multiple targets (also termed promiscuity) that can […]

Publications
Biochimie Mode of action of the antiprion drugs 6AP and GA on ribosome assisted protein folding

Biochimie

Dos S, Pang Y, Vishnu N, Voisset C, Galons H, Blondel M, Sanyal S
Biochimie - vol. 93 1047-1054 (2011)

Publications
Are pyridazines privileged structures?

MedChemComm

Wermuth CG
MedChemComm - vol. 2 935 (2011)

One can estimate that about 50% of all the drug molecules used in medicine contain a phenyl ring which can be substituted or not. The bioisosteric replacement of these phenyl rings by the corresponding pyridazine rings opens an access to several thousands of diaza analogues presenting more interaction possibilities, lower Log P values and improved […]

Publications
A rapid, inexpensive high throughput screen method for neurite outgrowth.

Current chemical genomics

Yeyeodu ST, Witherspoon SM, Gilyazova N, Ibeanu GC
Current chemical genomics - vol. 4 74-83 (2010)

Neurite outgrowth assays are the most common phenotypic screen to assess chemical effects on neuronal cells. Current automated assays involve expensive equipment, lengthy sample preparation and handling, costly reagents and slow rates of data acquisition and analysis. We have developed a high throughput screen (HTS) for neurite outgrowth using a robust neuronal cell model coupled […]

Publications
Targeting of the orphan receptor GPR35 by pamoic acid: a potent activator of extracellular signal-regulated kinase and β-arrestin2 with antinociceptive activity.

Molecular pharmacology

Zhao P, Sharir H, Kapur A, Cowan A, Geller EB, Adler MW, Seltzman HH, Reggio PH, Heynen-Genel S, Sauer M, Chung TDY, Bai Y, Chen W, Caron MG, Barak LS, Abood ME
Molecular pharmacology - vol. 78 560-568 (2010)

Known agonists of the orphan receptor GPR35 are kynurenic acid, zaprinast, 5-nitro-2-(3-phenylproplyamino) benzoic acid, and lysophosphatidic acids. Their relatively low affinities for GPR35 and prominent off-target effects at other pathways, however, diminish their utility for understanding GPR35 signaling and for identifying potential therapeutic uses of GPR35. In a screen of the Prestwick Library of drugs […]

Publications
A profiling platform for the characterization of transglutaminase 2 (TG2) inhibitors.

Journal of biomolecular screening : the official journal of the Society for Biomolecular Screening

Schaertl S, Prime M, Wityak J, Dominguez C, Munoz-Sanjuan I, Pacifici RE, Courtney S, Scheel A, Macdonald D
Journal of biomolecular screening : the official journal of the Society for Biomolecular Screening - vol. 15 478-487 (2010)

Huntington’s disease (HD) is associated with increased expression levels and activity of tissue transglutaminase (TG2), an enzyme primarily known for its cross-linking of proteins. To validate TG2 as a therapeutic target for HD in transgenic models and for eventual clinical development, a selective and brain-permeable inhibitor is required. Here, a comprehensive profiling platform of biochemical […]